http://www.afn.org/~poultry/flkman3.htm
(INFECTIOUS BRONCHITIS
AND ITS EFFECT ON EGG PRODUCTION AND EGG QUALITY)
...here is a helpful "poster" of Poultry Disease and anatomy (click on the magnifier to enlarge the section you wish to read)... also handy to print out...
I would imagine they have all been exposed and with the swollen eyes and such, I believe it is too far along to be helped in any way with ACV... I would suggest you put a call into your vet for the appropriate med and treat your entire flock.