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From the pics it looks like the chicks are in your home. Once they go out to the dirt they will be exposed to more cocci. I might be wrong about this but they aren't really exposed to cocci inside the home unless one is infected before you get it and they all peck at the infected poo. So yes I...

I don't see any blood in your pics, but not all cocci will cause blood in the stool. I think I see an intestinal lining...which is hard to tell. If they have been vaccinated you would probably have to use a Sulfa drug instead of Amprolium. Usually sellers make it a point to say their chicks...