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Sorry I have to agree with aart, the coop is too small, lacking ventilation and light, and that's why they're choosing to sleep in the run when there's a nice, high roost and plenty of fresh air. Also if there's 10 linear feet of roost inside the coop when the coop measures 3x5, then those...

Photo of your set up (both coop and run) would help with troubleshooting why they're not going in. Possible issues are overcrowding, lack of ventilation, lack of light, or just something about the layout that the chickens don't like.