Just about any critter could dig a hole like that. You could bury wire in a trench around your perimeter, or put down an apron of chicken wire, you can easily find out how in the coop section. In addition, I see you use chain link fence, that is really insecure especially down low as a raccoon could easily reach through grab a chicken and kill it. You might consider covering at least the lowest 3 ft of your run with hardware cloth.