I have built 3 different incubators, all different sizes. I'm having the hardest time getting the temperature consistent. Granted, they're not the most fancy, but they're not bad. Made out of fridges, so they have pretty good insulation. The latest one I put a fan at the top, piping air down to the bottom where the lightbulbs and more fans are, I thought that would definitely get rid of the inconsistencies but there is still about a degree difference from highest point to lowest point. Have you tested your temps at the top, bottom, sides, near the window? Is it consistent?
