When I go to run him back home he’s starting to run at me aggressively with his wing dropped, although he backs off when I stomp at him and shoo him off and chase him.
when I let them out of the pin every morning he does the same thing. So I have to chase and stomp.
The cockerel is likely thinking "the human used to be so nice but now he is constantly threatening, chasing and stomping at me -- I don't know what came over him but he has become dangerous and I need to keep him at a safe distance".
Acting in a threatening manner towards him, especially near "his hen", is what made him aggressive IMO.