Were you able to test the voltage at the charger? And again at the terminal end of a run?
How many linear feet of polyrope are you charging?
The PE2 looks to be on the light end. For reference, my Parmak 12 volt fencer is rated for 30 miles of fence, yet the voltage on poly tape goes from 16kv at the charger to the 7.9kv at the end of a single 1000 foot run. Two strands would be 2,000 feet, so I would expect the voltage to drop even more.
Again, poly rope is a different product than straight wire. Poly rope comes in at least two versions I'm aware of. One is the light version, with a few strands of very light wire braided inside a poly rope. The heavier version is several strands of more conductive wire inside the same rope. The second is more expensive, but allows you longer runs with less voltage dropoff.
For my birds, I am using 17 gauge aluminum wire only. It is durable and there is almost no voltage drop off on longer runs.