I was actually able to watch this last night. Yes Salatin uses what he calls "rails" for skids, could be wood or metal, I thought I got a glimpse of metal when I froze the video, but I'm not sure.
I couldn't find anything about why he likes those particular nest boxes, but collecting eggs by hand from 1200 hens is very inefficient to say the least. Maybe it's what he had left over, maybe he pays the interns to do that, but that's a lot of eggs, every day.
I had some time and Googled some other APPPA growers, and just pastured poultry in general. The one thing they all seemed to have in common was the roll out nest boxes, and even some small conveyor belts for their egg collection.
Probably in the not too distant future someone will do a redesign on this, but so far greenmachinesfarm is the best. IMO. The skids allowed Salatins to be a lot higher, but as that was greenmachinesfarm first go at it, who knows, someone could build an even better mousetrap soon!
There was one pastured poultry farm, here it is.......
http://learningandyearning.com/morning-chores that hired another company to build all their eggmobiles. They had solar panels on theirs too.
If I were designing a version of this, I think I would put the nest boxes under slightly shorter eves down both sides, maybe with plastic freezer door type curtains hanging down to keep out the rain etc. but I'd still use a chassis. You can compensate for the height off the ground of the wheels with this design I think, but you can't easily retrofit a skid type to a wheeled type. I admire what Salatins done with his farming and outreach, but I don't necessarily think he's a great engineer.
Other than buying a plan from Salatin, or making friends with someone who good at translating dimensions from pictures to paper.....idk what else to suggest, cardboard mock up? If you get the ratio you want you're going to be able to work with lumber dimensions. If you can follow plans but doubt your engineering skills, try it on a small scale. Keep in mind also that these types of structures are too big to just transport from one farm down the highway without an oversize permit. It's the transportation that's costly, not the permit.
Just my 2 cents worth.