We all have different goals and reasons to have chickens.  One of mine is to raise them for meat, which makes this easier for me.  I try to solve for the peace of the flock when I have issues like this.  I can sometimes reintegrate them but it soon comes to a point it is not worth the worry and work if it continues.  I'm fairly patient through puberty but after that my patience quickly runs out.  Sometimes I eat the aggressor, sometimes I eat the one being picked on, even if they are hens.  
I applaud you for staying with it for a year, I would never have lasted that long.