Unfortunately, in my experience, 99 plus or minus two degrees doesn't cut it with incubation. Anything over 101 for a long period will kill the embryo. Anything below 98 does the same. Just a two degree variation for long periods is extremely lethal (which I learned after much heartbreak, then scrapped my cheap incubator and spent good money on a high end one.).
If I were to guess, I'd say your incubator is running low, probably less than 98 degrees. I don't see any problem at all with putting the eggs in with the bearded dragon as long as you wash them first (to protect him from bacteria), and keep the humidity in there above 20 and below 50.
I would think it would work out really well if you moved the eggs over to your incubator on day 18 for lockdown, and increased the humidity to 60 or so. Hatch is actually optimal at just a bit cooler temps (like 98 degrees, which you are getting).
If I were to guess, I'd say your incubator is running low, probably less than 98 degrees. I don't see any problem at all with putting the eggs in with the bearded dragon as long as you wash them first (to protect him from bacteria), and keep the humidity in there above 20 and below 50.
I would think it would work out really well if you moved the eggs over to your incubator on day 18 for lockdown, and increased the humidity to 60 or so. Hatch is actually optimal at just a bit cooler temps (like 98 degrees, which you are getting).