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Yes, but you can still use the bird to produce 5 toed chicks. And through selective breeding, and culling, you can decrease the amount of gene carriers that you get.
I'm not saying it should or should NOT be done, I just wanted her to know, NOT to discount the chick. Its going to have to be a personal choice, like I've previously stated.
Personally, if she ends up being a good bird, I'd use her, and cull in later generations.