As with any breeding program you'll be selling off or eating the rejects. Even maintaining a line you should be hatching fourty or more birds per year.
Get numbered leg bands and make life easy. I use a separate small pen and coop for breeding. Put the selected females, 2 or 3 of them in there until the eggs are no longer fertile then add the sire to them. Now you've known parentage. Keep records of who came from what mating. In this way you know what parings make for best birds and those that don't niche.
With the above implied/practiced then loosely follow a basic breeding chart. Keep in mind you are running two sides, a side increasingly gaining the original dams genetics and a side increasingly gaining the sires. After so many years of this cross them. to mix the genes again and start anew, slowly gaining the sire of that mating one side and the dmas the other. After another five years mate the two sides again.
So you see, with minimal record keeping and maybe making your own chart to visualize the line breeding you are doing a line breeding program is not that hard to maintain.