I set my hova bator up so the pc fan blows up and the air is directed onto the top and sides, this also makes it warmer on the sides though, (99.9 in center 102.3 on edge)
I would think since you added a fan regardless of the voltage it should circulate the air. The fan that comes with the incubator blows the air out of the sides of the fan where a computer fan blows the air down. Also how much clearance do you have between your fan and where you mounted it? If it is too close it inhibits the air flow and it will not be as good. On one incubator I put the fan at 1/4" and on another incubator 3/8th" also most have a hole in the top where a fan is normally mounted which is needed to draw air in. If you are concerned about a chick getting it's head in the fan I did cut a fine mesh wire and put it over the fan so no way a chick could get it's head in it. Good luck...