No, it's about not letting young chicks, especially roosters bond to humans so they become confused about the human being apart of the flock, instead of a separate entity. My roosters don't feel the need to dominate me, because I am not apart of the flock.
Your point about the ambiguity of the human in relation to the rooster’s perception of the world has some merit. Hens don’t seem to have that problem though…….I would have thought this ambiguity would be species specific, not just to the males.
I have had a lot of roosters here. Some I’ve had as orphans and consequently they may have thought I was a flock or tribe member. They don’t flog me, or attack me. Others have similar experiences. There may be some merit in the argument that some roosters are just more aggressive towards humans than others. I’ve had those too.
It’s about how you the human interact with the rooster that’s the key.