Any ideas? Is it worth it to set those eggs to hatch?
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The problem is that EE's are crosses. You just don't know for sure what the genetics are for them. But you are a big step ahead in having the hens as EE's. At least you know they have at least one copy of the blue egg gene.
There are two different things that detemine egg color. First is basic shell color. It is going to be either blue or white. These genes come in pairs, so the hen will have two of these genes. Since blue is dominant, if just one of the genes is blue, the basic egg shell color will be blue. So you know that your hens have at least one blue egg gene but you don't know if they have two copies of blue or are split one blue and one white.
The brown or green color comes from a whole lot of other genes. I've read that as many as 13 different genes affect the brown that goes on an egg. That's why you can get so many different shades of brown. If a hen puts brown on top of a white base color egg, that egg is brown. If she puts brown on a blue egg, that egg is green. What shade of brown or green depends on how much brown she adds. If she does not put any brown on it, then the egg is either white or blue.
Since yours are laying blue eggs, the hens don't have any brown genes. But the New Hampshire rooster is from a line of brown egg layers. When you cross your NH rooster with an EE hen that lays blue eggs, the eggs will not be blue. They will either be green or brown.
The New Hampshire will also not contribute any blue egg genes. That base color is white. So what color the offspring lays depends on how many blue egg genes your EE hens have. If the hen has two copies of that blue egg gene, she will give one copy to each of her offspring, so all the pullets will have one blue egg gene from her and one white egg gene from their father and the base color will be blue. Remember, blue is dominant. Since they will get some brown from their father, those eggs will wind up green.
But if the hens are split for the blue egg gene where they have one blue and one white, then you will get some that lay green eggs and some that lay brown.
EE's come in a lot of colors, With out a pic. of them it is going to be hard to say what there chicks are going to look like.The rooster is the Red, the hens are the EE. The EE produces blue eggs.