He has always been fine with him. He doesnt do this with him at all. He circled me and was hesitating and then pecked my leg. I was scared tho but I need to go back in there this afternoon for water and will be prepared mentally.
Have you ever watched the Dog Whisperer? His biggest thing is the dog owners attitude and feelings, says that dogs pick up on your feelings and know if you are scared.
Possibly the same things with roosters, they know if you are scared of them and they may feed on that. I would suggest adding leather gloves to your "run access" clothing. It will give you added protection from pecking and since you are more protected you may be less afraid.
I would also suggest if he attacks your leg or even pecks your foot when you try to walk through him, as soon as he shows aggression to you quickly bend down and pin him to the ground. Don't worry about picking him up yet, just hold him down for a few min. Again this is a place where gloves will give you more confidence. If you miss pinning him down, don't chase him around just wait till the nextt time he goes at you and try again.
Remember, you are bigger, you are boss, you can KILL him. So when you go in the run go in with that attitude and remember your place and maybe he'll learn his place. If not then it's off to freezer camp, I"ve yet to meet a mean roo that wasnt' cured by being shipped off to freezer camp.
good luck, remember there's lots of free/cheap roos on CL, too many to stress over a mean one.