She spends most of her time on the top shelf in the coop; ( we have some old shelves in the coop that they can roost on, in addition to a rod and nesting boxes) she barely comes down to eat and drink, but manages to get down once in a while if the rooster is not in there during the day.
How many hens do you have?The rooster tries to mate with her, but she just flys up to the top shelf and stays there all day.
How old is your rooster?
The baldness is due to overmating.
She does have some pin feathers coming in, the ones that are broken/rubbed off won't come in until she molts.
A saddle may help, I've used those, but feathers can still get worn off even with the extra protection.
Since she is not coming down to eat/drink unless the rooster is not around, then it may be time to separate him out for a little while. You don't want her to lose condition.
You can separate him for a few hours each day to give your ladies some peace.