I have home made bators. Both with fans, but still some warmer/cooler spots. Heat source is 2 x 40W light bulbs mounted fairly high in the bators. I almost always incubate in egg cartons. I have found that by cutting the carton in half, so there are 6 cells/half gives me the perfect vehicle to move groups of eggs throughout the bator compartment to expose all eggs to the warmer/cooler spots.
Much as I assume might happen with a large clutch of eggs under a broody hen. The outer eggs would eventually swap eggs with the eggs in the middle as she repeatedly turns them.
I prop the cartons from side to side. Every day or so, I also give each egg a 1/4 turn in it's cell so that it is not always tipped in the same plane relative to the embryo position. Last hatch, I hot melted a piece of PVC pipe under each carton so I could see-saw the carton on the PVC pivot point. I never bothered cutting a hole in the bottom of my cartons, and have used styrofoam, (don't like it) plastic, and cardboard. When the eggs reach day 14, I take them out of the cartons and lay them flat for the remainder of the hatch, since chicks start to get into hatch position on day 14.