Here are some. The coop itself is smaller (about 4x4) and elevated so it was hard for me to get a good angle, but I hope these help.
I'd like to fix them both for the overall finished look as well as addressing any other possible concerns.
I'm guessing those gaps sit above framing, so likely aren't open to the outside at all? The only concern from them is that chicken droppings, moisture, etc might accumulate there over time - like dirt in the corners of a garage - till it starts to rot the plywood out from the cut edges. If you painted your cut edges, you won't even have that concern for many years to come.
Otherwise, anything can be used to fill or cover - paint, caulk, flashing, trim - just consider what those materials will be exposed to and choose accordingly.
when you build you next coop - and you will, consider setting the floor on the framing, then erecting the walls on that - just as they stick build a house. If needed to raise the house, you can either set the floor framing on piers (concrete block, PT 4x4s, etc) or attach legs to the outside so they don't become a hassle for your internal framing and decking. My own raised coop was built like a deck off the back of my barn. Screwed in my ledger board, framed out the flooring, lifted and supported into place, sunk and concreted my 4x4 posts on the outside of the floor framing. Levelled and secured at the desired heights (the ground was uneven), dropped on my floor panels (4x8, 4x4, 4x8) and secured, then attached my walls to the inside of the 4x4s. Trimmed the tops of the 4x4s to wall height, attached my rafters, installed purlins, laid on decking.
I'll make some changes for my next one as it will have some differing purpose (more storage, less sleeping) as a bachelor pad, quarantine pod, or single breed house and run) - but the method will remain largely the same - absent the ledger board, as it will be several hundred feet from the existing barn and run.