One thing to note...the deep litter method works best in a well-ventilated coop. Any strong ammonia smells shouldn't be happening if your litter is being managed well, turned often and appropriate dry, fresh materials added when needed. I keep flocks of 30+ birds and rarely ever smell anything in my coop except a rich, earthy composted smell....like the smell of dirt. Even if I hold the litter right up to my nose and take a deep whiff!

When I empty the coop down to the wood floor, it is dry as a bone.
Same here. No moisture in my flooring even after 6 months of litter development.
Same here. No moisture in my flooring even after 6 months of litter development.