OOOOH! This is good... have you seen this study?
https://www.tandfonline.com/doi/pdf/10.1080/03079450120078725 it has methods for manual in ovo vaccination.
"The manual in ovo vaccination method was validated in a pre- experimental trial involving 100 eggs and two operators. A small (1 mm diameter) hole was made in the apex of the air cell end of each egg and 200 m l vegetable dye injected into the relevant embryonic site via a needle inserted vertically through this hole. For IE injection, a sharp 21G ´ 1.5 inch hypodermic needle was inserted until the embryo was encountered and the dye injected into it. For EE injection, a 21G needle with the sharp tip removed was inserted through the hole, through the air cell membrane and into the extra-embryonic space to a depth of approximately 2.5 cm, carefully avoiding the embryo proper before dye was deposited. Eggs were subsequently broken out for determination of dye deposition site. The injection technique for both IE and EE deposition, for both operators, had an accuracy rate > 95%. This method was used in all subsequent experiments."