Congradulations on jumping into the world of keeping backyard chickens and the best of luck with your HOA. I'm a rule breacker as well but my HOA can go pound sand as far as I am concerned!
About the issue of smell....there shouldn't be an issue as long as you do a few things.
I use pine shavings in my coop and I sprinkle in some food grade Diamatiouse earth. That helps control the smell plus it helps with controling the flies, mites, fleas, and such. I know a lot of people here also use poop boards. The poop gathers on the board and then they are able to scrape it up and discard it. that will eliminate a big percentage of the poop in your coop. Also just keep the bedding turned.
You have come to a good place to get information and learn about chickens and keeping them. There are many knowledgable folks here.
Good luck and have fun!