Figured I'd post this in case anyone else went through the same thing. This is my third hatch. I've noticed two of my hens that lay extra large eggs we're doing okay through incubation but seem to take a turn after lockdown and either weren't coming out at all or we're having difficult hatches. Now I did get a few healthy chicks from these eggs with no issues. But the issues I've had every hatch were always in these eggs. They were coming out not ready. The first two from the hatch before last were massive umbilical bleeds. I was able to get them under control and they are now perfectly normal almost 9 week old chickens. One of them drowned in the egg. Something I am noticing very common with these premature hatchlings. They all seem to have too much juice going on in the egg. It's almost like they're hatching prematurely to get out of it. The hatch before last I had one pip and juice and yolk dripping out of the egg and it never did hatch. This past hatch I had two that died in the egg. Never even pipped. One came out perfectly fine and another started to zip but it was a wide gaping zip and had a lot of juice. I was worried about it drowning in the egg like the last one but I did not want to open the incubator so I used a long wooden skewer to reach through the air vent and tilt the egg to allow all the juice to run out the best I could allowed it to roll back upright and left it alone. The chick hatched and was again premature. This time no bleeding no umbilical issues but a yolk sack clearly hanging out. Because there was no bleeding I did not want to open the incubator as I had another one who had already externally pipped. So I figured since these were stragglers and I had already removed the other chicks I would just leave it in there. Knowing it would be dangerous to have that hanging out with other chicks stepping on it but knowing I had no other chicks to step on it I figured it was the best thing to do. Slowly but surely it did pull the yoke in. But at some point when I went to bed another egg hatched and I believe that chick probably stomped on it. Pulled that one out, left this one in. Because I got up to a lot of blood but where there had been a yolk sac there was now an empty bag that looked kind of like guts. Knowing that these could be part of the digestive system and the intestines I wasn't sure what to do. But I know the chick was acting perfectly normal and walking around with this hanging from it. I almost culled the chick But I couldn't bring myself to do it because it was in every other way acting so healthy. When it hatched there was a lot of green goo in there like it had taken its first poop in the egg. It was covered in slime and yolk and some shell pieces and never did fluff out. I finally pulled the baby out and decided I needed to attend to this chick. Thoroughly check the other eggs and saw that they would not be hatching. I decided to see what I could do with this little chick. I first soaked it in warm water for quite a while in my hand until everything loosened up and I gently brushed everything out of its down with a toothbrush. I used some hemos to pinch where it looked like a good spot above this bag hanging out and got no reaction from the chick. I slowly snipped some of it. No blood. So I took a big gulp and snipped it. Left about a fifth of an inch hanging down of what looked like a tube of flesh. Packed a little antibiotic ointment in it wrap the chick in a clean washcloth to absorb all the water from its bath. No blood no discomfort the entire time from the chick except when I first started putting the water on it. It quickly got used to the warm water and calmed down though. So once it was mostly dry I put it in with the other chicks. Pulled it out a few hours later and it had a little dried nub where I had snipped but was otherwise acting perfectly normal and healthy. But I knew there was a possibility that this was part of its intestines and this would only be temporary while it was still living off of its own resources. It began to eat and drink with the other chicks which was a very good sign so I kept watching for the last good sign. Everything coming out the other end. Was not able to catch it pooping. But it also was not failing. It was thriving just like the rest and eating and drinking. Finally I decided I couldn't take the suspense anymore so after it ate and drank I decided I was going to hold it until it pooped. Sure enough big fat healthy chick poop in my hand. Absolutely doing fine and the only difference from the others is the color of its fluff, like the rest of them lol I went with my gut and I'm glad I did. I wish I could explain this from a medical perspective but I'm not a professional. I just had a gut feeling that if this was supposed to be inside of the chick it would have had a blood supply and some sense of pain. Anyway there is the documentation and here are some pictures.
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... I sure hope it survives 
