I am glad all that rain is over with. We had to let the Chocolate Opringtons out for a long day, mucking out their coop, paving the inside to keep from another occurrence, then diatomaceous earth, and hay, and it went back to being clean, and not smelling. It is like that commercial about flood damage (as if it never happened), We couldn't let some of our prized birds live in that environment. Charlie spent the day having a grand old time making sure each girls eggs were fertile. They were having such a good time all day, that once dusk came, they did not want to go home.
I have found with birds that every time I clean out their coops, they don't like it. Fresh hay annoys them for awhile. I guess to them they don't like sudden change. A word to the wise, always wear eye and nose/mouth protection when working with diatomaceous earth. It is not toxic, however, there is always a stubborn hen or rooster that won't leave when you are laying it down. It is inevitable that they will freak out and flap their wings to put it in your eyes, nose and mouth. It will dry out your mucous membranes temporarily. And that is not pleasant. However, it controls mites and other pests by drying them out. Also, a little bit in the feed, not much, will keep your eggs cleaner for the most part.